C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 22, member 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040336 Slc22a23-001 ENSMUSG00000038267 10090 - 13:34179158-34345182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040336
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040336 2.011±1.28 1.534±0.64 3.558±1.44 6.105±2.27 1.281±0.30 10.464±4.67 0.574±0.05 5.949±3.61 4.820±1.24 7.498±2.25 0.852±0.19 0.662±0.00 3.016±0.96 0.164±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0002 VISTA 13:33848088-34450616
CIL_000823 CIL_000823_0002 VISTA 13:33947185-34549843
CIL_00015Z CIL_00015Z_0003 CGP 13:34162964-34345182
CIL_0003IW CIL_0003IW_0002 CGP 13:34179158-34652681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380298 SLC22A23-001 protein_coding Homo_sapiens 0 1343
ENST00000380302 SLC22A23-009 protein_coding Homo_sapiens 0 1784
ENST00000406686 SLC22A23-006 protein_coding Homo_sapiens 0 2442
ENST00000433689 SLC22A23-004 processed_transcript Homo_sapiens 0 248
ENST00000436008 SLC22A23-002 protein_coding Homo_sapiens 0 2713
ENST00000467144 SLC22A23-012 processed_transcript Homo_sapiens 0 399
ENST00000467177 SLC22A23-010 protein_coding Homo_sapiens 0 1295
ENST00000485307 SLC22A23-007 protein_coding Homo_sapiens 0 1454
ENST00000490273 SLC22A23-005 protein_coding Homo_sapiens 0 1727
ENST00000496753 SLC22A23-011 processed_transcript Homo_sapiens 0 486
ENST00000497691 SLC22A23-008 nonsense_mediated_decay Homo_sapiens 0 1040
ENST00000509933 PSMG4-010 nonsense_mediated_decay Homo_sapiens 0 213

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