C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 22, member 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148390 Slc22a23-002 ENSMUSG00000038267 10090 - 13:34179643-34344451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000148390
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000148390 3.389±0.62 2.276±0.33 7.456±1.57 11.031±7.36 4.394±1.22 12.999±5.53 1.987±0.30 15.591±2.64 10.837±1.65 11.208±2.91 1.747±0.38 1.725±0.97 8.869±5.23 0.437±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0002 VISTA 13:33848088-34450616
CIL_000823 CIL_000823_0002 VISTA 13:33947185-34549843
CIL_00015Z CIL_00015Z_0003 CGP 13:34162964-34345182
CIL_0003IW CIL_0003IW_0002 CGP 13:34179158-34652681

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380298 SLC22A23-001 protein_coding Homo_sapiens 0 915
ENST00000380302 SLC22A23-009 protein_coding Homo_sapiens 0 1895
ENST00000406686 SLC22A23-006 protein_coding Homo_sapiens 0 2124
ENST00000433689 SLC22A23-004 processed_transcript Homo_sapiens 0 248
ENST00000436008 SLC22A23-002 protein_coding Homo_sapiens 0 2013
ENST00000467144 SLC22A23-012 processed_transcript Homo_sapiens 0 399
ENST00000467177 SLC22A23-010 protein_coding Homo_sapiens 0 1406
ENST00000482874 SLC22A23-013 retained_intron Homo_sapiens 8.00001e-42 174
ENST00000485307 SLC22A23-007 protein_coding Homo_sapiens 0 1565
ENST00000490273 SLC22A23-005 protein_coding Homo_sapiens 0 1838
ENST00000496753 SLC22A23-011 processed_transcript Homo_sapiens 0 486
ENST00000497691 SLC22A23-008 nonsense_mediated_decay Homo_sapiens 0 1151
ENST00000509933 PSMG4-010 nonsense_mediated_decay Homo_sapiens 0 213

Loading