C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATR interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436480 ATRIP-202 ENSG00000164053 9606 + 3:48446846-48467644 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000436480
Transcript ID Breast
ENST00000436480 0.786±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U6 CIL_0007U6_0001 VISTA 3:47843366-48458182
CIL_0002UL CIL_0002UL_0001 CGP 3:48446710-48467645

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004527 IEA exonuclease activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161521 Atrip-004 protein_coding Mus_musculus 0 1090
ENSMUST00000045011 Atrip-001 protein_coding Mus_musculus 0 1090
ENSMUST00000160217 Atrip-003 nonsense_mediated_decay Mus_musculus 0 1090
ENSMUST00000160928 Atrip-002 nonsense_mediated_decay Mus_musculus 0 941

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