C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATR interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160928 Atrip-002 ENSMUSG00000025646 10090 - 9:109057936-109074097 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160928
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160928 3.507±0.66 9.958±0.81 2.052±0.07 2.304±0.07 7.156±0.99 3.971±1.02 2.149±0.91 2.748±0.71 1.753±0.38 5.281±0.59 1.025±0.25 5.179±2.65 0.919±0.06 0.446±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UL CIL_0002UL_0002 CGP 9:109057933-109074124

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320211 ATRIP-001 protein_coding Homo_sapiens 0 1796
ENST00000346691 ATRIP-002 protein_coding Homo_sapiens 0 1382
ENST00000357105 ATRIP-201 protein_coding Homo_sapiens 0 1688
ENST00000412052 ATRIP-005 protein_coding Homo_sapiens 0 1797
ENST00000421175 ATRIP-007 protein_coding Homo_sapiens 0 580
ENST00000424906 ATRIP-003 nonsense_mediated_decay Homo_sapiens 0 1688
ENST00000436480 ATRIP-202 protein_coding Homo_sapiens 0 941
ENST00000454733 ATRIP-008 nonsense_mediated_decay Homo_sapiens 0 444

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