C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATR interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160217 Atrip-003 ENSMUSG00000025646 10090 - 9:109057933-109074071 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonLiverMuscleOvaryPlacentaTestisENSMUST00000160217
Transcript ID Adipose Bladder Brain Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000160217 2.353±0.01 0.993±0.05 2.747±0.80 1.826±0.00 0.944±0.10 0.901±0.38 3.429±0.94 0.781±0.43 0.396±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UL CIL_0002UL_0002 CGP 9:109057933-109074124

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320211 ATRIP-001 protein_coding Homo_sapiens 0 1256
ENST00000346691 ATRIP-002 protein_coding Homo_sapiens 0 1256
ENST00000357105 ATRIP-201 protein_coding Homo_sapiens 0 1000
ENST00000412052 ATRIP-005 protein_coding Homo_sapiens 0 1107
ENST00000421175 ATRIP-007 protein_coding Homo_sapiens 0 579
ENST00000424906 ATRIP-003 nonsense_mediated_decay Homo_sapiens 0 1000
ENST00000436480 ATRIP-202 protein_coding Homo_sapiens 0 1090
ENST00000454733 ATRIP-008 nonsense_mediated_decay Homo_sapiens 0 442

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