C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073109 Ctdspl-001 ENSMUSG00000047409 10090 + 9:118926453-119043998 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073109 13.498±13.28 6.876±2.91 8.551±3.25 4.760±0.13 7.165±3.07 9.010±5.64 1.205±0.30 4.971±2.89 1.390±1.21 13.448±8.47 0.228±0.02 4.995±2.74 15.095±6.16 0.798±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0002 VISTA 9:118558597-119161666
CIL_00099X CIL_00099X_0002 VISTA 9:118563323-119168147
CIL_0005VQ CIL_0005VQ_0002 CGP 9:118606690-119043998
CIL_0005AN CIL_0005AN_0002 CGP 9:118926453-119071525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001933 IDA negative regulation of protein phosphorylation
GO:0003674 ND molecular_function
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005634 IEA nucleus
GO:0016311 IEA dephosphorylation
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome
GO:2000134 IDA negative regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273179 CTDSPL-001 protein_coding Homo_sapiens 0 1574
ENST00000310189 CTDSPL-005 processed_transcript Homo_sapiens 0 920
ENST00000416688 CTDSPL-007 protein_coding Homo_sapiens 0 202
ENST00000435525 CTDSPL-003 nonsense_mediated_decay Homo_sapiens 2e-31 139
ENST00000436654 CTDSPL-009 protein_coding Homo_sapiens 0 307
ENST00000443503 CTDSPL-002 protein_coding Homo_sapiens 0 1182
ENST00000447745 CTDSPL-008 protein_coding Homo_sapiens 0 658
ENST00000486978 CTDSPL-004 processed_transcript Homo_sapiens 0 713

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