C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S13 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437890 RPS13P2-001 ENSG00000228929 9606 - 1:52772194-52772648 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartMuscleOvaryTestisENST00000437890
Transcript ID Adrenal Breast Colon Heart Muscle Ovary Testis
ENST00000437890 0.182±0.00 0.030±0.00 0.056±0.00 0.027±0.00 0.368±0.00 0.260±0.18 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WE CIL_0006WE_0002 CGP 1:52684451-52827342

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183478 Rps13-ps1-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000170953 Rps13-201 protein_coding Mus_musculus 0 464
ENSMUST00000182017 Rps13-ps2-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000117927 Rps13-ps4-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000120338 Gm15483-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000117939 Rps13-ps5-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000122045 Rps13-ps7-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000118906 Rps13-ps8-001 processed_pseudogene Mus_musculus 4e-29 132

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