C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438127 AP000936.1-001 ENSG00000234268 9606 - 11:117035797-117036051 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000438127
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000438127 0.337±0.00 0.215±0.00 0.485±0.18 1.722±1.65 0.334±0.00 0.848±0.21 0.641±0.22 1.139±0.95 1.348±0.00 1.051±0.00 0.579±0.26 0.450±0.19 0.129±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053150 Rps27rt-001 protein_coding Mus_musculus 0 390
ENSMUST00000170122 Rps27-201 protein_coding Mus_musculus 0 390
ENSMUST00000173599 Gm19246-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000118062 Gm15531-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000118179 Rps27-ps1-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000119835 Gm14175-001 unprocessed_pseudogene Mus_musculus 0 274
ENSMUST00000121070 Gm11456-001 processed_pseudogene Mus_musculus 0 254

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