C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S27, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118179 Rps27-ps1-001 ENSMUSG00000081429 10090 + 1:63073774-63074019 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyLiverLungOvaryPlacentaTestisENSMUST00000118179
Transcript ID Adipose Bladder Brain Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118179 0.959±0.30 0.217±0.00 0.247±0.02 0.924±0.29 0.703±0.81 0.779±0.00 0.595±0.21 0.331±0.28 0.536±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039J CIL_00039J_0002 CGP 1:62703285-63114667
CIL_00039O CIL_00039O_0002 CGP 1:62958418-63176833

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368567 RPS27-001 protein_coding Homo_sapiens 0 337
ENST00000392558 RPS27-002 protein_coding Homo_sapiens 2e-38 163
ENST00000413068 AC013404.1-001 processed_pseudogene Homo_sapiens 0 248
ENST00000422457 RP11-175B9.3-001 processed_pseudogene Homo_sapiens 0 326
ENST00000423216 RP3-423B22.5-001 processed_pseudogene Homo_sapiens 0 315
ENST00000425207 AC002075.4-001 processed_pseudogene Homo_sapiens 0 298
ENST00000426040 AC098614.1-001 processed_pseudogene Homo_sapiens 0 250
ENST00000434429 RP11-20O24.1-001 processed_pseudogene Homo_sapiens 0 296
ENST00000438127 AP000936.1-001 processed_pseudogene Homo_sapiens 0 309
ENST00000455497 RP11-360D2.2-001 processed_pseudogene Homo_sapiens 0 296
ENST00000457554 RP11-761N21.2-001 processed_pseudogene Homo_sapiens 0 337
ENST00000463110 RPS27P29-001 processed_pseudogene Homo_sapiens 0 307
ENST00000469695 AC090602.2-001 processed_pseudogene Homo_sapiens 0 261
ENST00000477151 RPS27-004 processed_transcript Homo_sapiens 0 326
ENST00000480875 RP11-10G12.1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000486977 RP11-25I15.1-001 processed_pseudogene Homo_sapiens 0 326
ENST00000487608 RPS27P23-001 processed_pseudogene Homo_sapiens 0 244
ENST00000493224 RPS27-003 processed_transcript Homo_sapiens 0 326
ENST00000495392 RP11-543P15.1-001 processed_pseudogene Homo_sapiens 0 331
ENST00000496370 RPS27P14-001 processed_pseudogene Homo_sapiens 0 243
ENST00000611920 RPS27P14-001 processed_pseudogene Homo_sapiens 0 243

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