C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein L5 pseudogene 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438138 RPL5P26-001 ENSG00000230469 9606 + 10:69778962-69779838 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyTestisENST00000438138
Transcript ID Adrenal Colon Kidney Testis
ENST00000438138 0.026±0.00 0.012±0.00 0.026±0.00 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TI CIL_0007TI_0001 VISTA 10:69276019-69878973

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 869
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 869
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 869
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000140659 Rpl5-005 retained_intron Mus_musculus 0 366
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000151767 Rpl5-006 retained_intron Mus_musculus 0 202

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