C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438675 PPIAP10-001 ENSG00000224530 9606 + 20:53421199-53421656 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungMuscleOvaryENST00000438675
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Muscle Ovary
ENST00000438675 0.294±0.00 0.104±0.00 2.891±0.00 0.061±0.00 0.105±0.00 0.389±0.23 0.327±0.03 3.398±0.00 3.161±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GY CIL_0001GY_0001 CGP 20:52972407-53609907
CIL_0007L0 CIL_0007L0_0003 UCNEbase 20:53415325-53489310

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 315
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 307
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 291
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 279
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 276
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 263
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 244
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 1e-39 167
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 2e-26 122
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 8e-26 121
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 8e-26 121
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0.00000000000004 82

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