C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444011 RP3-522J7.5-001 ENSG00000236867 9606 + 22:49817248-49817712 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartOvaryTestisENST00000444011
Transcript ID Adrenal Brain Breast Colon Heart Ovary Testis
ENST00000444011 0.363±0.00 0.459±0.00 0.898±0.00 0.416±0.00 0.065±0.00 0.076±0.00 0.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IS CIL_0007IS_0001 CGP 22:49773283-49890078

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172070 Socs2-202 protein_coding Mus_musculus 4.06377e-44 182
ENSMUST00000170690 Socs2-201 protein_coding Mus_musculus 4.06377e-44 182
ENSMUST00000119917 Socs2-008 protein_coding Mus_musculus 4.06377e-44 182
ENSMUST00000020215 Socs2-001 protein_coding Mus_musculus 4.06377e-44 182
ENSMUST00000052528 Gm9847-201 protein_coding Mus_musculus 4.06377e-44 182
ENSMUST00000134918 Socs2-009 processed_transcript Mus_musculus 1.99965e-42 176
ENSMUST00000139210 Socs2-002 nonsense_mediated_decay Mus_musculus 8.00001e-41 171
ENSMUST00000155148 Socs2-011 processed_transcript Mus_musculus 6e-27 124
ENSMUST00000188378 RP23-458B6.3-001 unprocessed_pseudogene Mus_musculus 3e-25 119
ENSMUST00000128854 Socs2-010 processed_transcript Mus_musculus 6e-22 108

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