C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and WD repeat domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445245 BRWD1-013 ENSG00000185658 9606 - 21:39236718-39280213 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000445245
Transcript ID Muscle
ENST00000445245 2.373±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UB CIL_0007UB_0001 VISTA 21:38689433-39291200
CIL_0003GK CIL_0003GK_0001 CGP 21:39174769-39321559
CIL_0004KG CIL_0004KG_0001 CGP 21:39184176-39349647

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099502 Brwd1-201 protein_coding Mus_musculus 0 955
ENSMUST00000131322 Brwd1-016 nonsense_mediated_decay Mus_musculus 0 955
ENSMUST00000153398 Brwd1-009 protein_coding Mus_musculus 0 955
ENSMUST00000113829 Brwd1-001 protein_coding Mus_musculus 0 955
ENSMUST00000023631 Brwd1-002 protein_coding Mus_musculus 0 955
ENSMUST00000139566 Brwd1-013 nonsense_mediated_decay Mus_musculus 0 880
ENSMUST00000124370 Brwd1-014 protein_coding Mus_musculus 0 880
ENSMUST00000126629 Brwd1-011 retained_intron Mus_musculus 0 420

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