C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | bromodomain and WD repeat domain containing 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000153398  |
Brwd1-009 |
ENSMUSG00000022914 |
10090 | - |
16:96002435-96082447  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007UB | CIL_0007UB_0002 | VISTA | 16:95547910-96149564 |
| CIL_0003GK | CIL_0003GK_0002 | CGP | 16:95979933-96082526 |
| CIL_0004KG | CIL_0004KG_0002 | CGP | 16:95992092-96127729 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0006357 | IDA | regulation of transcription from RNA polymerase II promoter |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000333229
|
BRWD1-001 | protein_coding | Homo_sapiens | 0 | 5426 |
|
ENST00000341322
|
BRWD1-004 | protein_coding | Homo_sapiens | 0 | 571 |
|
ENST00000342449
|
BRWD1-002 | protein_coding | Homo_sapiens | 0 | 5391 |
|
ENST00000380800
|
BRWD1-016 | protein_coding | Homo_sapiens | 0 | 5404 |
|
ENST00000401091
|
RP4-597A16.3-001 | processed_pseudogene | Homo_sapiens | 0 | 350 |
|
ENST00000412604
|
BRWD1-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 1897 |
|
ENST00000424441
|
BRWD1-010 | protein_coding | Homo_sapiens | 0 | 985 |
|
ENST00000430093
|
BRWD1-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 1026 |
|
ENST00000445245
|
BRWD1-013 | nonsense_mediated_decay | Homo_sapiens | 0 | 955 |
|
ENST00000445668
|
BRWD1-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 1441 |
|
ENST00000446924
|
BRWD1-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 1973 |
|
ENST00000455867
|
BRWD1-014 | protein_coding | Homo_sapiens | 0 | 1677 |
|
ENST00000470108
|
BRWD1-008 | processed_transcript | Homo_sapiens | 0 | 390 |
|
ENST00000473813
|
BRWD1-006 | retained_intron | Homo_sapiens | 0 | 564 |
|
ENST00000484090
|
BRWD1-005 | retained_intron | Homo_sapiens | 0 | 215 |
|
ENST00000491564
|
BRWD1-007 | retained_intron | Homo_sapiens | 0 | 305 |
|
ENST00000546823
|
RP11-654D12.1-001 | processed_pseudogene | Homo_sapiens | 0 | 331 |
