C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2F (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445676 UBE2F-014 ENSG00000184182 9606 + 2:237967028-238041692 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastOvaryPlacentaTestisENST00000445676
Transcript ID Adipose Adrenal Breast Ovary Placenta Testis
ENST00000445676 11.591±0.00 11.377±0.00 10.021±0.00 19.603±0.00 21.461±0.00 20.839±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D3 CIL_0008D3_0001 VISTA 2:237594726-238198955
CIL_0003NH CIL_0003NH_0001 CGP 2:237858893-238042782

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178627 Ube2f-201 protein_coding Mus_musculus 0 621
ENSMUST00000171112 Ube2f-004 protein_coding Mus_musculus 0 621
ENSMUST00000191368 Ube2f-003 protein_coding Mus_musculus 0 621
ENSMUST00000171165 Ube2f-002 protein_coding Mus_musculus 0 621
ENSMUST00000059743 Ube2f-001 protein_coding Mus_musculus 0 621
ENSMUST00000071825 Gm5434-201 protein_coding Mus_musculus 0 497
ENSMUST00000185950 Ube2f-009 retained_intron Mus_musculus 0 418
ENSMUST00000080066 Gm7099-201 pseudogene Mus_musculus 0 374
ENSMUST00000188576 Ube2f-007 retained_intron Mus_musculus 1e-35 154
ENSMUST00000185697 Ube2f-005 retained_intron Mus_musculus 2e-23 113
ENSMUST00000189589 Ube2f-010 retained_intron Mus_musculus 9e-18 95
ENSMUST00000191533 Ube2f-006 protein_coding Mus_musculus 1e-16 92
ENSMUST00000181346 Gm26864-001 processed_pseudogene Mus_musculus 0.000000007 66

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