C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7099
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080066 Gm7099-201 ENSMUSG00000060647 10090 + 12:9429546-9430099 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonOvaryPlacentaTestisENSMUST00000080066
Transcript ID Bladder Colon Ovary Placenta Testis
ENSMUST00000080066 0.059±0.00 0.228±0.00 0.073±0.00 0.080±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009D5 CIL_0009D5_0002 VISTA 12:9037517-9639601
CIL_0009D2 CIL_0009D2_0002 VISTA 12:9068203-9669315
CIL_0008YE CIL_0008YE_0002 VISTA 12:9250103-9851455

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272930 UBE2F-001 protein_coding Homo_sapiens 0 721
ENST00000409332 UBE2F-004 protein_coding Homo_sapiens 0 486
ENST00000409633 UBE2F-011 protein_coding Homo_sapiens 0 558
ENST00000409953 UBE2F-020 protein_coding Homo_sapiens 0 634
ENST00000414443 UBE2F-201 protein_coding Homo_sapiens 0 490
ENST00000416292 UBE2F-010 protein_coding Homo_sapiens 0 438
ENST00000417231 UBE2F-013 nonsense_mediated_decay Homo_sapiens 0 632
ENST00000433241 UBE2F-016 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000433568 UBE2F-008 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000434137 UBE2F-023 protein_coding Homo_sapiens 0 481
ENST00000434655 UBE2F-017 protein_coding Homo_sapiens 0 669
ENST00000439338 UBE2F-019 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000439780 UBE2F-018 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000440223 UBE2F-006 nonsense_mediated_decay Homo_sapiens 7e-34 148
ENST00000441728 UBE2F-007 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000445676 UBE2F-014 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000448502 UBE2F-009 protein_coding Homo_sapiens 0 252
ENST00000449191 UBE2F-SCLY-002 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000449891 UBE2F-SCLY-001 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000454786 UBE2F-002 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000455999 UBE2F-012 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000472479 UBE2F-003 retained_intron Homo_sapiens 8.99999e-40 169
ENST00000480828 UBE2F-021 retained_intron Homo_sapiens 0 374
ENST00000566646 UBE2FP2-001 processed_pseudogene Homo_sapiens 0 385
ENST00000612130 UBE2F-202 protein_coding Homo_sapiens 0 721
ENST00000619760 C20orf194-002 processed_transcript Homo_sapiens 0 551

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