C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: bromodomain and WD repeat domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446924 BRWD1-009 ENSG00000185658 9606 - 21:39187246-39264941 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000446924
Transcript ID Placenta
ENST00000446924 1.483±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UB CIL_0007UB_0001 VISTA 21:38689433-39291200
CIL_0003GK CIL_0003GK_0001 CGP 21:39174769-39321559
CIL_0004KG CIL_0004KG_0001 CGP 21:39184176-39349647

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131322 Brwd1-016 nonsense_mediated_decay Mus_musculus 0 2933
ENSMUST00000099502 Brwd1-201 protein_coding Mus_musculus 0 1973
ENSMUST00000153398 Brwd1-009 protein_coding Mus_musculus 0 1973
ENSMUST00000113829 Brwd1-001 protein_coding Mus_musculus 0 1973
ENSMUST00000023631 Brwd1-002 protein_coding Mus_musculus 0 1973
ENSMUST00000124370 Brwd1-014 protein_coding Mus_musculus 0 728
ENSMUST00000152197 Brwd1-015 protein_coding Mus_musculus 0 503
ENSMUST00000126629 Brwd1-011 retained_intron Mus_musculus 0 492
ENSMUST00000139566 Brwd1-013 nonsense_mediated_decay Mus_musculus 0 492
ENSMUST00000147655 Brwd1-005 retained_intron Mus_musculus 0 233
ENSMUST00000130823 Brwd1-010 retained_intron Mus_musculus 2e-25 122

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