C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 29 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447578 VPS29-201 ENSG00000111237 9606 - 12:110491625-110502078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000447578
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000447578 3.298±0.00 22.525±0.00 20.185±0.00 4.669±0.00 3.791±0.72 5.914±0.00 5.414±0.29 6.120±0.00 10.485±0.00 7.225±1.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155671 Vps29-001 protein_coding Mus_musculus 0 883
ENSMUST00000118830 Vps29-002 protein_coding Mus_musculus 0 881
ENSMUST00000111729 Vps29-003 nonsense_mediated_decay Mus_musculus 0 813
ENSMUST00000117868 Vps29-007 protein_coding Mus_musculus 0 577
ENSMUST00000154686 Vps29-005 nonsense_mediated_decay Mus_musculus 0 573
ENSMUST00000132785 Vps29-006 processed_transcript Mus_musculus 0 521
ENSMUST00000145821 Vps29-004 protein_coding Mus_musculus 0 431

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