C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | pre-mRNA processing factor 31 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000447810  |
PRPF31-009 |
ENSG00000105618 |
9606 | + |
19:54115809-54124583  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005NN | CIL_0005NN_0001 | CGP | 19:54102728-54115675 |
| CIL_0005O3 | CIL_0005O3_0001 | CGP | 19:54107013-54131719 |
| CIL_0005OD | CIL_0005OD_0001 | CGP | 19:54115410-54155681 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000244 | IEA | spliceosomal tri-snRNP complex assembly |
| GO:0046540 | IEA | U4/U6 x U5 tri-snRNP complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000179769
|
Prpf31-201 | protein_coding | Mus_musculus | 0 | 1029 |
|
ENSMUST00000108636
|
Prpf31-004 | protein_coding | Mus_musculus | 0 | 1029 |
|
ENSMUST00000008517
|
Prpf31-001 | protein_coding | Mus_musculus | 0 | 1029 |
|
ENSMUST00000125782
|
Prpf31-003 | retained_intron | Mus_musculus | 0 | 907 |
|
ENSMUST00000143231
|
Prpf31-002 | retained_intron | Mus_musculus | 0 | 320 |
