C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PRP31 pre-mRNA processing factor 31 homolog (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000179769  |
Prpf31-201 |
ENSMUSG00000008373 |
10090 | + |
7:3629985-3642485  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005O3 | CIL_0005O3_0002 | CGP | 7:3620324-3642486 |
| CIL_0005OD | CIL_0005OD_0002 | CGP | 7:3629985-3661108 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000244 | ISA | spliceosomal tri-snRNP complex assembly |
| GO:0000398 | ISA | mRNA splicing, via spliceosome |
| GO:0005681 | IEA | spliceosomal complex |
| GO:0015030 | ISA | Cajal body |
| GO:0016607 | ISA | nuclear speck |
| GO:0043021 | ISA | ribonucleoprotein complex binding |
| GO:0046540 | ISA | U4/U6 x U5 tri-snRNP complex |
| GO:0071339 | ISS | MLL1 complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000321030
|
PRPF31-001 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000391755
|
PRPF31-003 | protein_coding | Homo_sapiens | 0 | 1890 |
|
ENST00000419967
|
PRPF31-201 | protein_coding | Homo_sapiens | 0 | 1557 |
|
ENST00000445124
|
PRPF31-006 | protein_coding | Homo_sapiens | 0 | 1077 |
|
ENST00000445811
|
PRPF31-005 | protein_coding | Homo_sapiens | 0 | 1107 |
|
ENST00000447810
|
PRPF31-009 | protein_coding | Homo_sapiens | 0 | 1029 |
|
ENST00000466404
|
PRPF31-004 | retained_intron | Homo_sapiens | 0 | 1105 |
|
ENST00000467851
|
PRPF31-010 | retained_intron | Homo_sapiens | 8e-34 | 147 |
|
ENST00000498612
|
PRPF31-008 | processed_transcript | Homo_sapiens | 0 | 808 |
|
ENST00000610903
|
PRPF31-213 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000611565
|
PRPF31-008 | processed_transcript | Homo_sapiens | 0 | 808 |
|
ENST00000612749
|
PRPF31-211 | protein_coding | Homo_sapiens | 0 | 1557 |
|
ENST00000613020
|
PRPF31-006 | protein_coding | Homo_sapiens | 0 | 1077 |
|
ENST00000613693
|
PRPF31-001 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000614518
|
PRPF31-204 | protein_coding | Homo_sapiens | 0 | 1557 |
|
ENST00000615175
|
PRPF31-202 | protein_coding | Homo_sapiens | 0 | 1557 |
|
ENST00000616532
|
PRPF31-003 | protein_coding | Homo_sapiens | 0 | 1890 |
|
ENST00000616732
|
PRPF31-212 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000618333
|
PRPF31-005 | protein_coding | Homo_sapiens | 0 | 1107 |
|
ENST00000618558
|
PRPF31-010 | retained_intron | Homo_sapiens | 8e-34 | 147 |
|
ENST00000618595
|
PRPF31-206 | protein_coding | Homo_sapiens | 0 | 1557 |
|
ENST00000618937
|
PRPF31-205 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000619220
|
PRPF31-217 | protein_coding | Homo_sapiens | 0 | 1557 |
|
ENST00000619391
|
PRPF31-210 | protein_coding | Homo_sapiens | 0 | 1557 |
|
ENST00000619439
|
PRPF31-207 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000619956
|
PRPF31-208 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000620142
|
PRPF31-203 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000620861
|
PRPF31-215 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000621578
|
PRPF31-004 | retained_intron | Homo_sapiens | 0 | 1105 |
|
ENST00000621588
|
PRPF31-214 | protein_coding | Homo_sapiens | 0 | 1557 |
|
ENST00000622164
|
PRPF31-009 | protein_coding | Homo_sapiens | 0 | 1029 |
|
ENST00000622300
|
PRPF31-218 | protein_coding | Homo_sapiens | 0 | 1814 |
|
ENST00000622387
|
PRPF31-209 | protein_coding | Homo_sapiens | 0 | 1557 |
|
ENST00000622636
|
PRPF31-216 | protein_coding | Homo_sapiens | 0 | 1557 |
