C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005O3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105619-ENSG00000105618 CGP 9606 19:54107013-54131719
GeneTranscriptPositionBiotype
ENSG00000105618 (PRPF31)
pre-mRNA processing factor 31 		ENST00000321030 (PRPF31-001) 54115457-54131709 protein_coding
ENST00000391755 (PRPF31-003) 54118271-54131709 protein_coding
ENST00000419967 (PRPF31-201) 54115410-54131719 protein_coding
ENST00000445124 (PRPF31-006) 54115779-54124630 protein_coding
ENST00000445811 (PRPF31-005) 54115754-54124654 protein_coding
ENST00000447810 (PRPF31-009) 54115809-54124583 protein_coding
ENST00000466404 (PRPF31-004) 54118409-54131709 retained_intron
ENST00000467851 (PRPF31-010) 54118406-54118811 retained_intron
ENST00000498612 (PRPF31-008) 54118613-54128197 processed_transcript
ENSG00000237017 (AC012314.8)
 ENST00000452097 (AC012314.8-001) 54119511-54125343 antisense
CIL_0005O3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006335-ENSMUSG00000008373 CGP 10090 7:3620324-3642486
GeneTranscriptPositionBiotype
ENSMUSG00000006335 (Tfpt)
TCF3 (E2A) fusion partner 		ENSMUST00000058880 (Tfpt-005) 3620335-3629086 nonsense_mediated_decay
ENSMUST00000108641 (Tfpt-001) 3620324-3629929 protein_coding
ENSMUST00000153143 (Tfpt-003) 3624594-3629579 nonsense_mediated_decay
ENSMUST00000155592 (Tfpt-002) 3620324-3629884 protein_coding
ENSMUST00000156194 (Tfpt-004) 3620779-3629579 processed_transcript
ENSMUSG00000008373 (Prpf31)
PRP31 pre-mRNA processing factor 31 homolog (yeast) 		ENSMUST00000008517 (Prpf31-001) 3629985-3642486 protein_coding
ENSMUST00000108636 (Prpf31-004) 3630557-3641229 protein_coding
ENSMUST00000125782 (Prpf31-003) 3630059-3637057 retained_intron
ENSMUST00000134047 (Prpf31-005) 3636095-3637057 retained_intron
ENSMUST00000143231 (Prpf31-002) 3629992-3631421 retained_intron
ENSMUST00000179769 (Prpf31-201) 3629985-3642485 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005O3_0001ENSG00000105618ENST00000321030ENST00000391755ENST00000419967ENST00000445124ENST00000445811ENST00000447810ENST00000466404ENST00000467851ENST00000498612ENSG00000237017ENST00000452097CIL_0005O3_0002ENSMUSG00000006335ENSMUST00000058880ENSMUST00000108641ENSMUST00000153143ENSMUST00000155592ENSMUST00000156194ENSMUSG00000008373ENSMUST00000008517ENSMUST00000108636ENSMUST00000125782ENSMUST00000134047ENSMUST00000143231ENSMUST00000179769
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005O3_0001ENSG00000105618ENST00000321030ENST00000391755ENST00000419967ENST00000445124ENST00000498612ENSG00000237017ENST00000452097CIL_0005O3_0002ENSMUSG00000006335ENSMUST00000058880ENSMUST00000108641ENSMUST00000153143ENSMUST00000155592ENSMUST00000156194ENSMUSG00000008373ENSMUST00000008517ENSMUST00000108636ENSMUST00000134047ENSMUST00000143231
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105618 ENST00000321030 7.768±0.00 N/A 2.426±0.00 9.719±4.49 4.901±0.00 4.077±0.00 0.852±0.00 5.650±0.00 6.844±0.00 1.148±0.00 N/A 8.919±3.88 16.784±3.31 N/A
ENST00000391755 19.904±0.00 37.081±0.00 N/A 21.225±0.00 13.804±10.44 20.998±0.00 7.551±6.61 13.068±11.00 15.972±0.00 9.786±8.30 10.283±0.00 26.247±10.90 24.664±3.01 24.034±0.00
ENST00000419967 N/A 14.634±0.00 N/A 2.471±0.00 N/A 7.519±5.25 0.630±0.00 N/A N/A 1.719±0.00 7.988±0.00 N/A N/A 10.795±1.17
ENST00000445124 N/A N/A N/A N/A N/A N/A N/A N/A 3.815±0.00 N/A N/A N/A N/A N/A
ENST00000445811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.159±0.00
ENSG00000237017 ENST00000452097 3.700±0.00 N/A N/A N/A 5.053±0.00 N/A N/A 5.348±0.00 N/A N/A N/A 4.845±0.00 N/A 5.492±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006335 ENSMUST00000058880 1.357±0.00 0.529±0.00 N/A N/A 0.982±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108641 2.481±0.54 1.403±0.57 4.596±0.66 6.658±2.29 2.020±0.71 2.078±0.97 2.424±0.76 2.452±0.58 3.658±2.46 2.190±0.37 2.577±0.77 2.640±2.11 7.374±3.18 4.998±1.85
ENSMUST00000153143 N/A N/A N/A 22.871±0.00 N/A N/A N/A N/A N/A N/A N/A 29.969±0.00 19.780±0.88 18.040±0.00
ENSMUST00000155592 2.977±1.23 1.383±0.85 6.066±0.92 5.310±1.35 1.301±0.60 1.289±0.47 2.065±0.88 2.243±0.63 2.156±1.01 1.619±0.50 4.114±1.15 4.249±3.69 3.755±1.22 5.811±0.78
ENSMUST00000156194 N/A N/A N/A N/A N/A 0.921±0.00 N/A N/A N/A N/A N/A 2.412±0.58 4.587±0.34 N/A
ENSMUSG00000008373 ENSMUST00000008517 2.179±0.46 2.105±0.32 3.641±0.26 4.183±1.76 1.685±0.79 2.800±0.86 0.864±0.06 1.337±0.41 4.849±5.29 2.108±1.11 0.898±0.23 4.984±1.46 4.823±2.07 3.614±0.67
ENSMUST00000108636 7.808±1.71 10.170±4.02 8.308±0.64 7.732±0.25 6.351±1.97 6.008±1.88 2.875±1.06 4.824±1.25 10.286±9.80 5.651±1.65 4.744±0.54 12.901±3.03 21.045±9.52 6.126±1.03
ENSMUST00000125782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134047 N/A 14.547±5.45 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143231 N/A N/A 7.796±0.52 7.442±0.14 3.109±0.00 N/A 4.792±0.43 N/A N/A N/A 4.209±0.68 6.685±0.39 N/A 2.449±0.00
ENSMUST00000179769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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