C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449786 AC005077.7-001 ENSG00000224273 9606 - 7:76117725-76132187 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverLungOvaryTestisENST00000449786
Transcript ID Breast Kidney Liver Lung Ovary Testis
ENST00000449786 0.511±0.00 0.030±0.00 0.706±0.00 0.173±0.00 0.472±0.00 1.029±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NT CIL_0006NT_0001 CGP 7:76048051-76287288

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026390 Rabgef1-002 protein_coding Mus_musculus 0 316
ENSMUST00000119797 Rabgef1-001 protein_coding Mus_musculus 0 316
ENSMUST00000119027 Rabgef1-004 protein_coding Mus_musculus 0 307
ENSMUST00000148264 Rabgef1-003 protein_coding Mus_musculus 0 307
ENSMUST00000143727 Rabgef1-005 retained_intron Mus_musculus 0 244
ENSMUST00000152788 Ppip5k2-003 retained_intron Mus_musculus 0.00004 53

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