| Transcript ID | Muscle | Ovary | Placenta |
|---|---|---|---|
| ENST00000450966 | 0.758±0.00 | 1.787±0.00 | 2.600±0.25 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ubiquitin specific peptidase 40 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000450966  |
USP40-201 |
ENSG00000085982 |
9606 | - |
2:233475520-233565590  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003R9 | CIL_0003R9_0001 | CGP | 2:233354507-233566782 |
| CIL_0007HK | CIL_0007HK_0001 | CGP | 2:233475520-233773310 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
| GO:0008234 | IEA | cysteine-type peptidase activity |
| GO:0036459 | IEA | ubiquitinyl hydrolase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000187758
|
Usp40-001 | protein_coding | Mus_musculus | 0 | 3506 |
|
ENSMUST00000188332
|
Usp40-002 | nonsense_mediated_decay | Mus_musculus | 0 | 3214 |
|
ENSMUST00000040783
|
Usp40-003 | protein_coding | Mus_musculus | 0 | 2486 |
|
ENSMUST00000186315
|
Usp40-004 | retained_intron | Mus_musculus | 0 | 1626 |
|
ENSMUST00000187871
|
Usp40-006 | retained_intron | Mus_musculus | 0 | 302 |
|
ENSMUST00000189586
|
Usp40-005 | retained_intron | Mus_musculus | 0 | 296 |
