C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006SI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054312-ENSDARG00000018382 CGP 7955 13:31911575-31972572
GeneTranscriptPositionBiotype
ENSDARG00000018382 (prkcha)
protein kinase C, eta, a
ENSDART00000034745 (prkcha-001) 31940422-31972572 protein_coding
ENSDARG00000054312 (slc38a6)
solute carrier family 38, member 6
ENSDART00000076479 (slc38a6-001) 31911575-31931472 protein_coding
CIL_0006SI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139974-ENSG00000027075 CGP 9606 14:60981114-61550976
GeneTranscriptPositionBiotype
ENSG00000027075 (PRKCH)
protein kinase C, eta
ENST00000332981 (PRKCH-001) 61321717-61550976 protein_coding
ENST00000536400 (PRKCH-003) 61477167-61549946 processed_transcript
ENST00000552875 (PRKCH-018) 61322753-61353989 processed_transcript
ENST00000553265 (PRKCH-021) 61347891-61450885 protein_coding
ENST00000553726 (PRKCH-020) 61344324-61457181 protein_coding
ENST00000553830 (PRKCH-017) 61326913-61445721 protein_coding
ENST00000553831 (PRKCH-019) 61344242-61450872 protein_coding
ENST00000553846 (PRKCH-024) 61527937-61547846 processed_transcript
ENST00000553889 (PRKCH-007) 61452771-61457653 processed_transcript
ENST00000554835 (PRKCH-016) 61281184-61299854 processed_transcript
ENST00000555082 (PRKCH-002) 61322664-61550976 protein_coding
ENST00000555110 (PRKCH-026) 61525090-61529205 processed_transcript
ENST00000555185 (PRKCH-014) 61187559-61530584 protein_coding
ENST00000555233 (PRKCH-009) 61463069-61529209 processed_transcript
ENST00000555382 (PRKCH-010) 61525652-61547886 processed_transcript
ENST00000555542 (PRKCH-015) 61280953-61443211 protein_coding
ENST00000555604 (PRKCH-013) 61457506-61476516 processed_transcript
ENST00000555628 (PRKCH-025) 61492193-61547864 processed_transcript
ENST00000555906 (PRKCH-023) 61281149-61449252 protein_coding
ENST00000556164 (PRKCH-022) 61361074-61449247 protein_coding
ENST00000556245 (PRKCH-004) 61543362-61550972 processed_transcript
ENST00000556778 (PRKCH-028) 61187569-61453265 protein_coding
ENST00000557294 (PRKCH-027) 61187569-61322455 protein_coding
ENST00000557473 (PRKCH-006) 61442558-61450941 protein_coding
ENST00000557559 (PRKCH-008) 61456842-61457625 processed_transcript
ENST00000557585 (PRKCH-005) 61390694-61457557 protein_coding
ENST00000557599 (PRKCH-011) 61525652-61549802 processed_transcript
ENSG00000126814 (TRMT5)
tRNA methyltransferase 5
ENST00000261249 (TRMT5-001) 60971451-60981358 protein_coding
ENST00000553903 (TRMT5-002) 60979474-60981170 protein_coding
ENST00000555420 (TRMT5-003) 60979523-60981051 protein_coding
ENSG00000139974 (SLC38A6)
solute carrier family 38, member 6
ENST00000267488 (SLC38A6-001) 60981162-61052630 protein_coding
ENST00000354886 (SLC38A6-201) 60981114-61083712 protein_coding
ENST00000451406 (SLC38A6-003) 60981293-61083729 protein_coding
ENST00000491344 (SLC38A6-004) 60981277-61083729 nonsense_mediated_decay
ENST00000524402 (SLC38A6-010) 60982196-61037683 nonsense_mediated_decay
ENST00000525585 (SLC38A6-007) 60982544-60987590 retained_intron
ENST00000525723 (SLC38A6-002) 60981226-61083733 nonsense_mediated_decay
ENST00000526105 (SLC38A6-011) 60982365-61037118 protein_coding
ENST00000526539 (SLC38A6-015) 61046107-61083633 nonsense_mediated_decay
ENST00000527591 (SLC38A6-005) 60981437-61052445 nonsense_mediated_decay
ENST00000528350 (SLC38A6-012) 60982557-61043208 nonsense_mediated_decay
ENST00000529212 (SLC38A6-014) 61043150-61052461 protein_coding
ENST00000529345 (SLC38A6-006) 60981444-61083732 nonsense_mediated_decay
ENST00000532148 (SLC38A6-009) 60981237-61002236 processed_transcript
ENST00000533744 (SLC38A6-013) 60982557-61046072 protein_coding
ENST00000534758 (SLC38A6-008) 61019536-61031039 protein_coding
ENST00000554072 (SLC38A6-016) 60984764-61034299 retained_intron
ENST00000554304 (SLC38A6-019) 60981233-61004637 processed_transcript
ENST00000554498 (SLC38A6-018) 61051886-61052464 retained_intron
ENST00000556938 (SLC38A6-017) 61051815-61052459 retained_intron
ENSG00000247287 (RP11-902B17.1)
ENST00000500036 (RP11-902B17.1-001) 61303021-61322818 antisense
ENST00000554086 (RP11-902B17.1-002) 61298164-61322794 antisense
ENSG00000258926 (RP11-47I22.1)
ENST00000556543 (RP11-47I22.1-001) 61537508-61545287 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SI_0001ENSDARG00000018382ENSDART00000034745ENSDARG00000054312ENSDART00000076479CIL_0006SI_0002ENSG00000027075ENST00000332981ENST00000536400ENST00000552875ENST00000553265ENST00000553726ENST00000553830ENST00000553831ENST00000553846ENST00000553889ENST00000554835ENST00000555082ENST00000555110ENST00000555185ENST00000555233ENST00000555382ENST00000555542ENST00000555604ENST00000555628ENST00000555906ENST00000556164ENST00000556245ENST00000556778ENST00000557294ENST00000557473ENST00000557559ENST00000557585ENST00000557599ENSG00000126814ENST00000261249ENST00000553903ENST00000555420ENSG00000139974ENST00000267488ENST00000354886ENST00000451406ENST00000491344ENST00000524402ENST00000525585ENST00000525723ENST00000526105ENST00000526539ENST00000527591ENST00000528350ENST00000529212ENST00000529345ENST00000532148ENST00000533744ENST00000534758ENST00000554072ENST00000554304ENST00000554498ENST00000556938ENSG00000247287ENST00000500036ENST00000554086ENSG00000258926ENST00000556543
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SI_0001ENSDARG00000018382ENSDART00000034745ENSDARG00000054312ENSDART00000076479CIL_0006SI_0002ENSG00000027075ENST00000332981ENST00000536400ENST00000553889ENST00000555082ENST00000556245ENST00000556778ENST00000557473ENST00000557585ENSG00000126814ENST00000261249ENSG00000139974ENST00000267488ENST00000354886ENST00000554304ENSG00000247287ENST00000500036ENSG00000258926ENST00000556543
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018382 ENSDART00000034745 N/A N/A N/A 0.230±0.14 N/A N/A 1.211±0.23 3.893±0.15 0.122±0.00 N/A 0.402±0.00 N/A N/A N/A
ENSDARG00000054312 ENSDART00000076479 N/A N/A N/A 1.806±0.83 N/A N/A 5.926±3.07 12.613±5.84 0.915±0.00 N/A 1.438±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000027075 ENST00000332981 13.637±0.00 12.170±0.00 0.786±0.00 2.062±0.00 3.901±1.03 4.435±2.83 3.015±1.91 4.847±0.00 2.148±0.50 15.504±13.37 5.266±0.00 3.566±1.00 10.143±3.33 3.568±0.00
ENST00000536400 N/A N/A N/A N/A N/A N/A 4.691±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000552875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.671±0.00 N/A N/A N/A
ENST00000554835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555082 5.536±0.00 N/A N/A 0.784±0.00 3.158±0.00 N/A 1.653±0.00 N/A 1.186±0.00 6.466±0.00 3.933±0.00 1.357±0.00 5.238±2.18 3.429±0.80
ENST00000555110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556245 N/A N/A N/A N/A N/A N/A N/A 1.068±0.00 N/A N/A N/A N/A N/A N/A
ENST00000556778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.333±0.00 N/A N/A N/A
ENST00000557294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557473 N/A N/A 4.146±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557585 N/A N/A N/A 2.142±0.00 7.166±0.00 N/A N/A N/A N/A 12.280±0.00 N/A N/A N/A N/A
ENST00000557599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000126814 ENST00000261249 2.376±0.00 1.270±0.00 1.039±0.00 1.645±0.07 2.590±0.12 1.762±0.34 0.810±0.18 1.094±0.00 2.684±0.00 2.022±1.01 N/A 3.517±0.39 1.134±0.36 5.052±3.15
ENST00000553903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139974 ENST00000267488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.722±0.09 N/A
ENST00000354886 N/A N/A N/A N/A 3.681±0.00 N/A N/A N/A N/A 1.874±0.00 N/A N/A N/A N/A
ENST00000451406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554304 N/A N/A 10.913±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000247287 ENST00000500036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00 N/A N/A N/A
ENST00000554086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258926 ENST00000556543 N/A 0.635±0.00 N/A 0.793±0.00 N/A N/A 0.183±0.08 N/A N/A 0.027±0.00 0.462±0.00 0.033±0.00 0.083±0.00 0.041±0.00

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