C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidase (mitochondrial processing) beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453466 PMPCB-004 ENSG00000105819 9606 + 7:103297457-103312312 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000453466
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000453466 15.470±0.00 21.444±0.00 19.816±0.00 19.248±0.00 16.496±0.00 15.907±0.00 21.023±0.00 15.073±0.00 9.092±0.00 4.029±1.74 18.984±0.56 11.244±2.33 29.570±3.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CJ CIL_0005CJ_0001 CGP 7:103099776-103329511
CIL_0001RL CIL_0001RL_0002 CGP 7:103297422-103344873

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0008152 IEA metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030882 Pmpcb-001 protein_coding Mus_musculus 0 1565
ENSMUST00000125693 Pmpcb-002 retained_intron Mus_musculus 0 839
ENSMUST00000150861 Pmpcb-006 retained_intron Mus_musculus 0 396

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