C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: poly(A) polymerase gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453839 PAPOLG-004 ENSG00000115421 9606 + 2:60760135-60798466 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalKidneyPlacentaENST00000453839
Transcript ID Adipose Adrenal Kidney Placenta
ENST00000453839 0.676±0.00 0.523±0.00 0.839±0.00 0.352±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GM CIL_0008GM_0001 VISTA 2:60234269-60835938
CIL_0009DA CIL_0009DA_0001 VISTA 2:60267677-60869129
CIL_0008PG CIL_0008PG_0001 VISTA 2:60327921-60929753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004652 IEA polynucleotide adenylyltransferase activity
GO:0016779 IEA nucleotidyltransferase activity
GO:0043631 IEA RNA polyadenylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150711 Papolg-004 processed_transcript Mus_musculus 0 2451
ENSMUST00000020513 Papolg-001 protein_coding Mus_musculus 0 1415
ENSMUST00000102863 Papolg-002 protein_coding Mus_musculus 0 1044
ENSMUST00000145013 Papolg-003 protein_coding Mus_musculus 0 669

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