C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454541 RP11-179H18.5-001 ENSG00000227437 9606 + 10:119638456-119639082 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyMuscleOvaryTestisENST00000454541
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Muscle Ovary Testis
ENST00000454541 0.146±0.00 0.220±0.00 0.309±0.00 0.099±0.00 0.091±0.00 0.033±0.00 0.225±0.00 0.119±0.03 0.079±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GP CIL_0004GP_0002 CGP 10:119571802-119677819

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102696 Rps8-001 protein_coding Mus_musculus 0 634
ENSMUST00000140687 Gm15501-001 transcribed_processed_pseudogene Mus_musculus 0 623
ENSMUST00000133910 Gm15501-002 processed_transcript Mus_musculus 0 623
ENSMUST00000118709 Rps8-ps2-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000121572 Gm14438-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000180940 Gm11353-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000122418 Gm14323-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000092523 Gm10712-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000120833 Gm14414-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000186115 RP23-393D20.3-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000172445 Rps8-ps1-201 processed_pseudogene Mus_musculus 0 466
ENSMUST00000144051 Rps8-007 retained_intron Mus_musculus 0 394
ENSMUST00000140226 Rps8-002 retained_intron Mus_musculus 0 281

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