C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S8, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172445 Rps8-ps1-201 ENSMUSG00000071303 10090 - 10:56354619-56355074 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172445
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172445 0.470±0.19 0.249±0.00 1.508±1.29 3.713±0.76 0.214±0.10 0.209±0.01 0.160±0.05 0.303±0.14 1.922±3.31 0.129±0.00 0.209±0.07 0.558±0.28 0.122±0.03 0.169±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372209 RPS8-003 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000396651 RPS8-001 protein_coding Homo_sapiens 0 593
ENST00000415328 RP11-229A12.2-001 processed_pseudogene Homo_sapiens 0 392
ENST00000426177 RPS8P6-001 processed_pseudogene Homo_sapiens 1e-30 137
ENST00000454541 RP11-179H18.5-001 processed_pseudogene Homo_sapiens 0 466
ENST00000470475 RPS8-005 processed_transcript Homo_sapiens 0 255
ENST00000484005 RP11-252I14.1-001 processed_pseudogene Homo_sapiens 0 350
ENST00000485390 RPS8-004 processed_transcript Homo_sapiens 0 588
ENST00000497035 RPS8-002 processed_transcript Homo_sapiens 0 586

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