C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 29257
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186115 RP23-393D20.3-001 ENSMUSG00000100228 10090 + 1:133025801-133026439 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186115
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186115 0.065±0.00 0.722±0.64 0.504±0.00 0.089±0.01 0.129±0.00 0.104±0.04 0.194±0.03 0.292±0.31 0.392±0.16 0.216±0.13 0.360±0.15 0.234±0.10 0.147±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Z CIL_00084Z_0002 VISTA 1:132779893-133380922
CIL_00056L CIL_00056L_0002 CGP 1:132880273-133030561

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372209 RPS8-003 protein_coding Homo_sapiens 0 532
ENST00000396651 RPS8-001 protein_coding Homo_sapiens 0 695
ENST00000415328 RP11-229A12.2-001 processed_pseudogene Homo_sapiens 0 512
ENST00000426177 RPS8P6-001 processed_pseudogene Homo_sapiens 0 200
ENST00000454541 RP11-179H18.5-001 processed_pseudogene Homo_sapiens 0 523
ENST00000460876 RP11-2F9.3-001 processed_pseudogene Homo_sapiens 0 603
ENST00000464658 RPS8-006 processed_transcript Homo_sapiens 0 532
ENST00000481419 AC006539.2-001 processed_pseudogene Homo_sapiens 2e-22 110
ENST00000484005 RP11-252I14.1-001 processed_pseudogene Homo_sapiens 0 359
ENST00000485390 RPS8-004 processed_transcript Homo_sapiens 0 695
ENST00000492328 ZNF90-004 processed_transcript Homo_sapiens 2e-22 110
ENST00000497035 RPS8-002 processed_transcript Homo_sapiens 0 540

Loading