C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144051 Rps8-007 ENSMUSG00000047675 10090 - 4:117154510-117156069 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000144051
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000144051 116.716±72.50 49.527±10.78 242.447±18.04 100.859±10.43 136.637±66.90 299.850±21.03 52.766±19.15 91.616±15.45 147.561±56.65 160.075±29.63 196.645±19.48 212.468±11.98 37.010±16.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0002 VISTA 4:117090982-117692314

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372209 RPS8-003 protein_coding Homo_sapiens 0 254
ENST00000396651 RPS8-001 protein_coding Homo_sapiens 0 531
ENST00000454541 RP11-179H18.5-001 processed_pseudogene Homo_sapiens 0 394
ENST00000460876 RP11-2F9.3-001 processed_pseudogene Homo_sapiens 0 409
ENST00000462935 RPS8P3-001 processed_pseudogene Homo_sapiens 0 383
ENST00000464658 RPS8-006 processed_transcript Homo_sapiens 0 254
ENST00000470475 RPS8-005 processed_transcript Homo_sapiens 0 281
ENST00000485390 RPS8-004 processed_transcript Homo_sapiens 0 510
ENST00000497035 RPS8-002 processed_transcript Homo_sapiens 0 508

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