C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEP domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456315 DEPDC1-002 ENSG00000024526 9606 - 1:68474152-68497114 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungOvaryPlacentaTestisENST00000456315
Transcript ID Breast Colon Lung Ovary Placenta Testis
ENST00000456315 0.275±0.00 1.287±0.00 0.064±0.01 0.555±0.23 0.279±0.04 2.374±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000038 CIL_000038_0002 CGP 1:68428822-68497221

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0017053 IDA transcriptional repressor complex
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120272 Depdc1a-001 protein_coding Mus_musculus 0 2649
ENSMUST00000029825 Depdc1a-003 protein_coding Mus_musculus 0 2610
ENSMUST00000106041 Depdc1a-002 protein_coding Mus_musculus 0 1024

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