C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin 2 (phosphorylase kinase, delta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456319 CALM2-006 ENSG00000143933 9606 - 2:47160637-47176511 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryENST00000456319
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000456319 42.599±0.00 14.228±0.00 176.770±0.00 52.313±1.00 32.419±0.00 24.184±0.00 20.750±0.00 20.384±0.00 15.812±0.00 52.299±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0001 VISTA 2:46768636-47372293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040440 Calm2-001 protein_coding Mus_musculus 0 850
ENSMUST00000143965 Calm2-003 retained_intron Mus_musculus 0 641
ENSMUST00000121087 Gm7308-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000150137 Calm2-002 retained_intron Mus_musculus 0 582
ENSMUST00000118521 Gm14480-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000117133 Gm15720-001 processed_pseudogene Mus_musculus 0 381

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