C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribophorin II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456400 RPN2-007 ENSG00000118705 9606 + 20:37228678-37241429 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XV CIL_0004XV_0001 CGP 20:36996349-37179588
CIL_00020D CIL_00020D_0001 CGP 20:37101226-37241623
CIL_0004Y1 CIL_0004Y1_0001 CGP 20:37178410-37261835

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006487 IEA protein N-linked glycosylation
GO:0008250 IEA oligosaccharyltransferase complex
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126248 Rpn2-004 processed_transcript Mus_musculus 0 442
ENSMUST00000127252 Rpn2-003 processed_transcript Mus_musculus 0 442
ENSMUST00000029171 Rpn2-002 protein_coding Mus_musculus 0 442
ENSMUST00000116380 Rpn2-001 protein_coding Mus_musculus 0 442
ENSMUST00000141934 Rpn2-011 retained_intron Mus_musculus 0 279

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