C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribophorin II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126248 Rpn2-004 ENSMUSG00000027642 10090 + 2:157283583-157325735 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000126248
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000126248 67.129±10.85 52.886±16.20 28.432±5.25 44.043±2.90 46.360±16.86 16.157±1.91 31.706±16.25 36.233±12.48 58.134±4.45 6.096±0.87 74.406±9.36 66.581±22.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XV CIL_0004XV_0002 CGP 2:157145893-157279549
CIL_00020D CIL_00020D_0002 CGP 2:157208550-157326319
CIL_0004Y1 CIL_0004Y1_0002 CGP 2:157279017-157347506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237530 RPN2-001 protein_coding Homo_sapiens 0 2237
ENST00000373622 RPN2-003 protein_coding Homo_sapiens 0 2041
ENST00000373632 RPN2-002 protein_coding Homo_sapiens 0 532
ENST00000437329 RPN2-006 protein_coding Homo_sapiens 0 283
ENST00000456102 RPN2-004 protein_coding Homo_sapiens 0 532
ENST00000456400 RPN2-007 protein_coding Homo_sapiens 0 442
ENST00000462163 RPN2-005 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000470352 RPN2-008 processed_transcript Homo_sapiens 0 283

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