C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribophorin II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127252 Rpn2-003 ENSMUSG00000027642 10090 + 2:157279426-157326056 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127252
Transcript ID Adipose Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127252 21.652±6.92 53.896±0.78 37.562±18.85 10.208±1.45 35.927±8.60 45.018±8.06 15.050±0.48 8.471±0.93 121.935±5.50 196.701±76.21 33.543±5.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XV CIL_0004XV_0002 CGP 2:157145893-157279549
CIL_00020D CIL_00020D_0002 CGP 2:157208550-157326319
CIL_0004Y1 CIL_0004Y1_0002 CGP 2:157279017-157347506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237530 RPN2-001 protein_coding Homo_sapiens 0 2281
ENST00000373622 RPN2-003 protein_coding Homo_sapiens 0 1908
ENST00000373632 RPN2-002 protein_coding Homo_sapiens 0 532
ENST00000437329 RPN2-006 protein_coding Homo_sapiens 0 327
ENST00000456102 RPN2-004 protein_coding Homo_sapiens 0 532
ENST00000456400 RPN2-007 protein_coding Homo_sapiens 0 442
ENST00000462163 RPN2-005 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000470352 RPN2-008 processed_transcript Homo_sapiens 0 327

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