C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00020D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101353-ENSG00000118705 CGP 9606 20:37101226-37241623
GeneTranscriptPositionBiotype
ENSG00000118705 (RPN2)
ribophorin II 		ENST00000237530 (RPN2-001) 37179046-37241623 protein_coding
ENST00000373622 (RPN2-003) 37179161-37241619 protein_coding
ENST00000373632 (RPN2-002) 37179318-37210165 protein_coding
ENST00000437329 (RPN2-006) 37228634-37241418 protein_coding
ENST00000456102 (RPN2-004) 37178410-37210150 protein_coding
ENST00000456400 (RPN2-007) 37228678-37241429 protein_coding
ENST00000462163 (RPN2-005) 37179330-37207443 nonsense_mediated_decay
ENST00000470352 (RPN2-008) 37229870-37241417 processed_transcript
ENSG00000236159 (RP3-343K2.4)
 ENST00000447075 (RP3-343K2.4-001) 37165774-37166312 processed_pseudogene
CIL_00020D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074627-ENSMUSG00000027642 CGP 10090 2:157208550-157326319
GeneTranscriptPositionBiotype
ENSMUSG00000027642 (Rpn2)
ribophorin II 		ENSMUST00000029171 (Rpn2-002) 157279146-157326319 protein_coding
ENSMUST00000116380 (Rpn2-001) 157279059-157326319 protein_coding
ENSMUST00000123639 (Rpn2-008) 157314551-157316208 processed_transcript
ENSMUST00000125311 (Rpn2-009) 157294842-157295353 processed_transcript
ENSMUST00000126248 (Rpn2-004) 157283583-157325735 processed_transcript
ENSMUST00000127252 (Rpn2-003) 157279426-157326056 processed_transcript
ENSMUST00000141934 (Rpn2-011) 157316177-157322471 retained_intron
ENSMUST00000142463 (Rpn2-006) 157279017-157289561 processed_transcript
ENSMUST00000149924 (Rpn2-010) 157319783-157322160 retained_intron
ENSMUST00000150349 (Rpn2-005) 157279569-157290711 processed_transcript
ENSMUST00000156007 (Rpn2-007) 157281943-157290592 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020D_0001ENSG00000118705ENST00000237530ENST00000373622ENST00000373632ENST00000437329ENST00000456102ENST00000456400ENST00000462163ENST00000470352ENSG00000236159ENST00000447075CIL_00020D_0002ENSMUSG00000027642ENSMUST00000029171ENSMUST00000116380ENSMUST00000123639ENSMUST00000125311ENSMUST00000126248ENSMUST00000127252ENSMUST00000141934ENSMUST00000142463ENSMUST00000149924ENSMUST00000150349ENSMUST00000156007
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020D_0001ENSG00000118705ENST00000237530ENST00000373622ENST00000373632ENST00000470352ENSG00000236159ENST00000447075CIL_00020D_0002ENSMUSG00000027642ENSMUST00000029171ENSMUST00000116380ENSMUST00000126248ENSMUST00000127252
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118705 ENST00000237530 40.257±0.00 55.267±0.00 9.452±0.00 7.919±4.95 32.884±8.66 27.048±12.88 10.501±0.00 53.143±34.46 59.360±52.65 36.519±28.40 11.679±10.32 62.496±24.97 181.700±26.24 60.948±0.00
ENST00000373622 N/A 10.076±0.00 N/A 9.779±0.00 7.992±0.00 N/A N/A N/A N/A N/A 19.714±0.00 12.299±0.00 N/A 73.585±42.17
ENST00000373632 N/A N/A N/A N/A N/A N/A N/A N/A 4.947±0.00 N/A N/A N/A N/A N/A
ENST00000437329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470352 N/A N/A N/A N/A 40.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236159 ENST00000447075 N/A 0.157±0.00 N/A 0.163±0.00 0.026±0.00 N/A N/A N/A 0.667±0.00 N/A N/A 0.033±0.00 N/A 0.199±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027642 ENSMUST00000029171 N/A N/A N/A 11.510±0.00 N/A N/A N/A N/A N/A N/A 5.582±1.22 N/A N/A 38.075±0.00
ENSMUST00000116380 29.730±8.43 64.956±16.97 18.752±2.97 28.372±2.00 42.615±8.33 60.850±12.91 N/A 26.628±11.55 34.542±10.97 39.647±9.31 N/A 54.448±18.21 56.541±18.26 40.820±0.00
ENSMUST00000123639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126248 67.129±10.85 52.886±16.20 N/A 28.432±5.25 44.043±2.90 46.360±16.86 16.157±1.91 31.706±16.25 36.233±12.48 58.134±4.45 6.096±0.87 74.406±9.36 N/A 66.581±22.17
ENSMUST00000127252 21.652±6.92 N/A 53.896±0.78 N/A 37.562±18.85 N/A 10.208±1.45 35.927±8.60 45.018±8.06 15.050±0.48 8.471±0.93 121.935±5.50 196.701±76.21 33.543±5.77
ENSMUST00000141934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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