C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FCF1 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456841 FCF1P6-001 ENSG00000225671 9606 - 1:50405430-50406024 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonTestisENST00000456841
Transcript ID Adrenal Colon Testis
ENST00000456841 0.018±0.00 0.016±0.00 0.133±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063G CIL_00063G_0002 CGP 1:50048014-50423500
CIL_0008K0 CIL_0008K0_0001 VISTA 1:50240418-50841642
CIL_0008UT CIL_0008UT_0001 VISTA 1:50268874-50870617
CIL_0008US CIL_0008US_0001 VISTA 1:50333169-50934241
CIL_0009AC CIL_0009AC_0001 VISTA 1:50399523-51001114

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021669 Fcf1-001 protein_coding Mus_musculus 0 604
ENSMUST00000171040 Fcf1-002 protein_coding Mus_musculus 0 603
ENSMUST00000117230 Gm11221-001 processed_pseudogene Mus_musculus 0 577

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