C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457038 RP11-40H20.5-001 ENSG00000229985 9606 + 1:27176751-27177277 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLungMuscleOvaryTestisENST00000457038
Transcript ID Adipose Adrenal Brain Breast Colon Lung Muscle Ovary Testis
ENST00000457038 0.408±0.00 0.054±0.00 0.129±0.00 0.119±0.00 0.161±0.00 0.110±0.00 0.480±0.00 0.062±0.00 0.051±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054220 Rpl18a-201 protein_coding Mus_musculus 0 503
ENSMUST00000117288 Gm15427-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000121555 Rpl18-ps1-001 processed_pseudogene Mus_musculus 0 475
ENSDART00000030215 rpl18a-001 protein_coding Danio_rerio 0 339
ENSDART00000148933 rpl18a-002 nonsense_mediated_decay Danio_rerio 0 259

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