C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457497 AC016708.2-001 ENSG00000230076 9606 + 2:214847128-214847445 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000457497
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000457497 0.113±0.00 0.185±0.00 0.066±0.00 0.065±0.00 0.932±0.00 0.051±0.00 0.125±0.00 0.202±0.09 0.165±0.01 0.400±0.00 0.804±0.47 0.299±0.07 0.186±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AP CIL_0000AP_0002 CGP 2:214725646-215138428

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 416
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 416
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 416
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 416
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 383
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 366
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 366
ENSMUST00000081908 Rpl10l-001 protein_coding Mus_musculus 0 322
ENSMUST00000121511 Gm14460-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 0 209
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 0 189

Loading