C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457507 RP11-234N17.1-001 ENSG00000227034 9606 + 1:99008218-99008474 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000457507
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000457507 0.155±0.00 0.393±0.00 0.815±0.00 0.102±0.00 0.051±0.00 0.054±0.00 0.051±0.00 0.521±0.25 0.050±0.00 7.851±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C8 CIL_0007C8_0002 CGP 1:98890245-99309590

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 331
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 331
ENSMUST00000140659 Rpl5-005 retained_intron Mus_musculus 0 331
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 331
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000121088 Gm11307-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000151767 Rpl5-006 retained_intron Mus_musculus 0 241
ENSMUST00000121897 Gm15877-001 processed_pseudogene Mus_musculus 0 200

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