C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histidyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457527 HARS-009 ENSG00000170445 9606 - 5:140673904-140691377 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000457527
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000457527 19.882±7.07 19.874±0.00 4.679±3.42 6.491±0.00 8.311±4.41 5.919±0.00 12.566±0.00 3.501±0.00 12.149±0.00 17.582±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZH CIL_0006ZH_0001 CGP 5:140647058-140674124
CIL_0006ZK CIL_0006ZK_0001 CGP 5:140664676-140674124
CIL_0006ZJ CIL_0006ZJ_0001 CGP 5:140670794-140692024
CIL_0006ZR CIL_0006ZR_0001 CGP 5:140673173-140699291

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004821 NAS histidine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA:IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006412 NAS translation
GO:0006418 IEA:TAS tRNA aminoacylation for protein translation
GO:0006427 IEA histidyl-tRNA aminoacylation
GO:0010467 TAS gene expression

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001416 Hars-201 protein_coding Mus_musculus 0 1267

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