C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spectrin repeat containing, nuclear envelope 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460912 SYNE1-028 ENSG00000131018 9606 - 6:152121780-152168280 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartKidneyMuscleOvaryPlacentaTestisENST00000460912
Transcript ID Adrenal Heart Kidney Muscle Ovary Placenta Testis
ENST00000460912 13.130±0.00 7.250±0.00 14.358±0.00 3.161±0.00 3.274±0.00 2.502±0.00 9.730±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EH CIL_0005EH_0001 CGP 6:151494030-152129619
CIL_0005EI CIL_0005EI_0001 CGP 6:151656691-152637801
CIL_0002QH CIL_0002QH_0002 CGP 6:152121684-152724567

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095899 Syne1-202 protein_coding Mus_musculus 0 1611

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