C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461060 RP11-621K7.1-001 ENSG00000226439 9606 - 4:61775449-61775850 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMusclePlacentaTestisENST00000461060
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Placenta Testis
ENST00000461060 0.036±0.00 0.184±0.00 0.381±0.00 0.149±0.00 0.035±0.00 0.034±0.00 0.074±0.00 0.099±0.00 0.067±0.00 0.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WQ CIL_0001WQ_0001 CGP 4:57030773-62078335
CIL_0001WJ CIL_0001WJ_0001 CGP 4:61201258-64409468

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 0 470
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 0 470
ENSMUST00000117447 Rps12-ps10-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000139165 Rps12-ps9-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000119773 Rps12-ps19-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000121980 Rps12-ps1-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000092231 Gm4925-001 transcribed_processed_pseudogene Mus_musculus 0 385
ENSMUST00000168843 Gm4925-002 processed_transcript Mus_musculus 0 385

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