C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TNF receptor-associated factor 3 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462122 TRAF3IP1-004 ENSG00000204104 9606 + 2:238347183-238397680 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverOvaryPlacentaTestisENST00000462122
Transcript ID Bladder Brain Colon Kidney Liver Ovary Placenta Testis
ENST00000462122 0.746±0.00 2.188±0.00 1.161±0.00 0.582±0.00 1.404±0.00 8.900±7.49 8.171±0.00 67.191±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NE CIL_0003NE_0001 CGP 2:238244038-238400900
CIL_0004UF CIL_0004UF_0002 CGP 2:238320441-238452250

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187588 Traf3ip1-002 retained_intron Mus_musculus 0 647
ENSMUST00000047242 Traf3ip1-001 protein_coding Mus_musculus 0 645
ENSMUST00000189341 Traf3ip1-003 protein_coding Mus_musculus 0 645

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