C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ribophorin II | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000462163  |
RPN2-005 |
ENSG00000118705 |
9606 | + |
20:37179330-37207443  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004XV | CIL_0004XV_0001 | CGP | 20:36996349-37179588 |
| CIL_00020D | CIL_00020D_0001 | CGP | 20:37101226-37241623 |
| CIL_0004Y1 | CIL_0004Y1_0001 | CGP | 20:37178410-37261835 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006487 | IEA | protein N-linked glycosylation |
| GO:0008250 | IEA | oligosaccharyltransferase complex |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000126248
|
Rpn2-004 | processed_transcript | Mus_musculus | 0 | 462 |
|
ENSMUST00000127252
|
Rpn2-003 | processed_transcript | Mus_musculus | 0 | 462 |
|
ENSMUST00000029171
|
Rpn2-002 | protein_coding | Mus_musculus | 0 | 462 |
|
ENSMUST00000116380
|
Rpn2-001 | protein_coding | Mus_musculus | 0 | 462 |
|
ENSMUST00000150349
|
Rpn2-005 | processed_transcript | Mus_musculus | 0 | 335 |
|
ENSMUST00000156007
|
Rpn2-007 | processed_transcript | Mus_musculus | 0 | 333 |
|
ENSMUST00000142463
|
Rpn2-006 | processed_transcript | Mus_musculus | 0 | 257 |
|
ENSMUST00000150035
|
Mroh8-002 | processed_transcript | Mus_musculus | 0.000000002 | 68 |
|
ENSMUST00000143663
|
Mroh8-001 | protein_coding | Mus_musculus | 0.000000002 | 68 |
