C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonucleic acid export 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462438 RAE1-004 ENSG00000101146 9606 + 20:57371134-57378463 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastKidneyLiverLungOvaryENST00000462438
Transcript ID Adrenal Bladder Breast Kidney Liver Lung Ovary
ENST00000462438 0.963±0.00 0.471±0.00 0.434±0.00 0.356±0.00 0.164±0.00 0.396±0.03 0.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YW CIL_0008YW_0001 VISTA 20:56856738-57458908
CIL_0008TD CIL_0008TD_0001 VISTA 20:56859467-57462541
CIL_0008HJ CIL_0008HJ_0001 VISTA 20:57109440-57710361
CIL_0008BA CIL_0008BA_0001 VISTA 20:57139654-57744237
CIL_0002XR CIL_0002XR_0001 CGP 20:57329759-57379211

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123039 Rae1-004 retained_intron Mus_musculus 0 477
ENSMUST00000029013 Rae1-001 protein_coding Mus_musculus 1e-31 143

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