C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462678 RP4-545C24.5-001 ENSG00000242978 9606 - 7:144434826-144435314 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLungOvaryENST00000462678
Transcript ID Adrenal Colon Kidney Lung Ovary
ENST00000462678 0.061±0.00 0.056±0.00 0.090±0.00 0.028±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XS CIL_0004XS_0001 CGP 7:144397240-144836395

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 466
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 444
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 442
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 442
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 436
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 436
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 431
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 398
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 202
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 9.94922e-44 180
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 5e-38 161
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 3e-35 152

Loading