Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	Zic family member 4
ENST00000462748	ZIC4-002	ENSG00000174963	9606	-	3:147395852-147406133	protein_coding

Expression Patterns

No expression data.

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007JF	CIL_0007JF_0001	UCNEbase	3:146747615-148369526
CIL_00092K	CIL_00092K_0001	VISTA	3:147012442-147613983
CIL_00092J	CIL_00092J_0001	VISTA	3:147031749-147633313
CIL_0008O7	CIL_0008O7_0001	VISTA	3:147107359-147708549
CIL_0009D8	CIL_0009D8_0001	VISTA	3:147360760-147962816
CIL_0009BL	CIL_0009BL_0001	VISTA	3:147375234-147976562

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0046872	IEA	metal ion binding

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000173933	Zic4-003	protein_coding	Mus_musculus	0	865
ENSMUST00000170572	Zic4-005	retained_intron	Mus_musculus	0	865
ENSMUST00000172646	Zic4-001	protein_coding	Mus_musculus	0	863
ENSMUST00000174611	Zic4-004	retained_intron	Mus_musculus	0	863
ENSMUST00000066384	Zic4-008	protein_coding	Mus_musculus	0	760
ENSMUST00000172858	Zic4-010	retained_intron	Mus_musculus	0	760
ENSMUST00000173054	Zic4-011	protein_coding	Mus_musculus	0	619
ENSMUST00000174212	Zic4-007	protein_coding	Mus_musculus	0	527
ENSMUST00000075888	Zic2-001	protein_coding	Mus_musculus	0	307
ENSMUST00000065360	Zic1-002	protein_coding	Mus_musculus	0	292
ENSMUST00000034927	Zic1-001	protein_coding	Mus_musculus	0	292
ENSDART00000010774	zic2a-001	protein_coding	Danio_rerio	0	230

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