C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | zinc finger protein of the cerebellum 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000172646  |
Zic4-001 |
ENSMUSG00000036972 |
10090 | + |
9:91368970-91387793  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007JF | CIL_0007JF_0002 | UCNEbase | 9:90313955-92046042 |
| CIL_0009BL | CIL_0009BL_0002 | VISTA | 9:90773325-91374668 |
| CIL_0009D8 | CIL_0009D8_0002 | VISTA | 9:90787948-91390091 |
| CIL_0008O7 | CIL_0008O7_0002 | VISTA | 9:91066858-91668202 |
| CIL_00092J | CIL_00092J_0002 | VISTA | 9:91145767-91747284 |
| CIL_00092K | CIL_00092K_0002 | VISTA | 9:91162357-91763891 |
| CIL_000589 | CIL_000589_0002 | CGP | 9:91358058-91389348 |
| CIL_000580 | CIL_000580_0002 | CGP | 9:91362413-92209772 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IDA | DNA binding |
| GO:0005634 | IDA | nucleus |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000010774
|
zic2a-001 | protein_coding | Danio_rerio | 0 | 342 |
|
ENST00000282928
|
ZIC1-001 | protein_coding | Homo_sapiens | 0 | 422 |
|
ENST00000376335
|
ZIC2-001 | protein_coding | Homo_sapiens | 0 | 381 |
|
ENST00000383075
|
ZIC4-001 | protein_coding | Homo_sapiens | 0 | 2721 |
|
ENST00000425731
|
ZIC4-201 | protein_coding | Homo_sapiens | 0 | 2370 |
|
ENST00000462748
|
ZIC4-002 | protein_coding | Homo_sapiens | 0 | 863 |
|
ENST00000463250
|
ZIC4-010 | protein_coding | Homo_sapiens | 0 | 204 |
|
ENST00000463850
|
ZIC4-014 | processed_transcript | Homo_sapiens | 0 | 564 |
|
ENST00000464144
|
ZIC4-008 | processed_transcript | Homo_sapiens | 0 | 361 |
|
ENST00000464502
|
ZIC4-013 | processed_transcript | Homo_sapiens | 0 | 414 |
|
ENST00000472749
|
ZIC4-007 | processed_transcript | Homo_sapiens | 0 | 1511 |
|
ENST00000473123
|
ZIC4-003 | protein_coding | Homo_sapiens | 0 | 1607 |
|
ENST00000480015
|
ZIC4-017 | processed_transcript | Homo_sapiens | 0 | 200 |
|
ENST00000484399
|
ZIC4-004 | protein_coding | Homo_sapiens | 0 | 1796 |
|
ENST00000491672
|
ZIC4-009 | protein_coding | Homo_sapiens | 0 | 457 |
|
ENST00000493664
|
ZIC4-005 | retained_intron | Homo_sapiens | 0 | 2266 |
|
ENST00000494569
|
ZIC4-006 | retained_intron | Homo_sapiens | 0 | 1513 |
|
ENST00000525172
|
ZIC4-202 | protein_coding | Homo_sapiens | 0 | 2370 |
|
ENST00000620342
|
ZIC2-201 | protein_coding | Homo_sapiens | 0 | 381 |
