C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myoferlin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463743 MYOF-006 ENSG00000138119 9606 - 10:93306429-93379987 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000463743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000463743 5.782±0.00 3.246±0.00 0.643±0.00 0.330±0.00 7.799±0.00 4.730±0.00 2.876±0.00 3.727±0.00 0.154±0.00 4.322±0.00 0.634±0.00 2.972±0.86 6.079±1.56 3.445±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZY CIL_0000ZY_0001 CGP 10:93073475-93482317
CIL_0000ZZ CIL_0000ZZ_0001 CGP 10:93306429-93529092

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172095 Myof-202 protein_coding Mus_musculus 0 2987
ENSMUST00000041475 Myof-201 protein_coding Mus_musculus 0 2987
ENSDART00000026000 MYOF-201 protein_coding Danio_rerio 1e-33 150

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